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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs57564454 chr5:151688441 A/G FILIP1L chr3:99548985-99833357:- 0.22 6.3 6.63E-10 Box Plot
THCA rs5759660 chr22:23586945 C/G POM121L10P chr22:25053448-25054732:- -0.36 -6.41 3.56E-10 Box Plot
THCA rs5759662 chr22:23589560 A/T POM121L10P chr22:25053448-25054732:- 0.35 6.19 1.28E-9 Box Plot
THCA rs57597334 chr8:11789554 C/G SGK223 chr8:8175258-8244008:- -0.45 -8.44 3.94E-16 Box Plot
THCA rs5759978 chr22:24079671 T/C IGLL3 chr22:25713888-25716191:+ 0.37 6.81 2.91E-11 Box Plot
THCA rs57603936 chr17:18273653 TCAAACAAACAC/T LOC162632 chr17:16614993-16707819:+ 0.52 9.36 3.06E-19 Box Plot
THCA rs5760495 chr22:25000461 C/T GGTLC2 chr22:22986946-22990373:+ 0.29 6.35 4.88E-10 Box Plot
THCA rs57625634 chr8:11784346 ATTGT/A SGK223 chr8:8175258-8244008:- -0.44 -8.14 3.56E-15 Box Plot
THCA rs57629785 chr8:11235150 C/A SGK223 chr8:8175258-8244008:- 0.48 9.29 5.25E-19 Box Plot
THCA rs57652013 chr2:101088529 T/C LOC285359 chr3:101431278-101432259:+ 0.35 6.9 1.62E-11 Box Plot
THCA rs57655799 chr8:11782417 A/C SGK223 chr8:8175258-8244008:- -0.45 -8.61 1.07E-16 Box Plot
THCA rs57660611 chr11:48671351 G/A FOLH1B chr11:89372395-89431886:+ 0.44 6.36 4.81E-10 Box Plot
THCA rs5770568 chr22:49985339 C/T ADSL chr22:40742504-40786467:+ 0.47 6.07 2.54E-9 Box Plot
THCA rs5770568 chr22:49985339 C/T DGCR14 chr22:19117792-19132197:- 0.44 6.01 3.75E-9 Box Plot
THCA rs5770568 chr22:49985339 C/T EIF3D chr22:36906897-36925483:- 0.45 6.1 2.23E-9 Box Plot